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CIE IGCSE Biology Notes

4.1.1 Composition of Biological Molecules

Biological molecules, also known as biomolecules, are the cornerstone of life, intricately involved in the structure and function of cells. This comprehensive exploration delves into the chemical elements constituting carbohydrates, fats, and proteins, and their roles in cellular processes.

Introduction to Biological Molecules

Biological molecules, the very essence of life, are complex compounds made up primarily of carbon (C), hydrogen (H), oxygen (O), nitrogen (N), and smaller amounts of other elements like sulfur (S) and phosphorus (P). These molecules form the structure of cells and perform numerous functions necessary for life.

Carbohydrates

Elements and Structure

  • Main Elements: Carbon, Hydrogen, Oxygen
  • Typical Ratio: Often in a 1:2:1 ratio (C:H:O)
  • Types:
    • Monosaccharides, like glucose and fructose, simple sugars with a single unit.
    • Disaccharides, such as sucrose and lactose, formed by two monosaccharides.
    • Polysaccharides, like starch, glycogen, and cellulose, made from many sugar units.

Role in Cellular Processes

  • Energy Source: The primary source of energy. Glucose is crucial in cellular respiration to produce ATP.
  • Structural Role: Cellulose provides structural support in plant cell walls; chitin does the same in fungi and the exoskeleton of arthropods.
  • Storage: Starch in plants and glycogen in animals serve as energy reserves.
Carbohydrates- monosaccharides disaccharides and polysaccharides

Image courtesy of petrroudny

Fats and Oils (Lipids)

Elements and Structure

  • Main Elements: Carbon, Hydrogen, Oxygen
  • Structure: Composed of a glycerol molecule bonded to three fatty acid chains.
  • Types:
    • Saturated fats with single bonds between carbon atoms.
    • Unsaturated fats, which include mono- and poly-unsaturated fats with one or more double bonds.

Role in Cellular Processes

  • Energy Storage: Fats are a high-energy storage form, storing more energy per gram than carbohydrates.
  • Cell Membrane Composition: Lipids, especially phospholipids, are essential components of cell membranes, providing flexibility and permeability.
  • Thermal Insulation: In animals, fats are significant for thermal insulation and cushioning of organs.
Saturated and unsaturated fatty acids structure

Image courtesy of Ali

Proteins

Elements and Structure

  • Main Elements: Carbon, Hydrogen, Oxygen, Nitrogen, and sometimes Sulfur.
  • Building Blocks: Composed of amino acids, which are organic compounds made from an amino group, a carboxyl group, and a unique side chain.
  • Structural Complexity:
    • Primary structure: The sequence of amino acids in a polypeptide chain.
    • Secondary structure: Includes α-helices and β-pleated sheets, formed by hydrogen bonding.
    • Tertiary structure: The three-dimensional shape formed by folds due to side chain interactions.
    • Quaternary structure: The combination of more than one polypeptide chain.

Role in Cellular Processes

  • Enzymatic Functions: Proteins serve as enzymes, speeding up biochemical reactions.
  • Structural Functions: Provide structural support (e.g., collagen in connective tissues, keratin in hair and nails).
  • Transport: Proteins like hemoglobin transport substances; membrane proteins regulate entry and exit of materials.
  • Regulatory Roles: Act as hormones (e.g., insulin) and receptors, crucial in signaling pathways.
Structural Complexity of proteins, primary, secondary, tertiary and quaternary structures

Image courtesy of Anthony Agbay

Significance of Molecular Composition in Biological Molecules

The specific molecular composition of carbohydrates, fats, and proteins dictates their diverse roles in biological processes. For instance, the simple structure of carbohydrates makes them a readily available energy source. In contrast, the complex, energy-dense composition of fats makes them ideal for long-term energy storage. Proteins, with their diverse structures, are the most versatile biomolecules, involved in almost every process within the body.

Each type of biomolecule is indispensable, playing unique and vital roles in the maintenance and functionality of living organisms. From providing energy and structural support to facilitating communication and transportation within cells, these molecules are fundamental to the intricate mechanisms of life.

Conclusion

In summary, understanding the composition and function of carbohydrates, fats, and proteins is crucial in the field of biology. This knowledge not only aids in grasping cellular processes but also provides insight into the broader aspects of biology, including nutrition, metabolism, genetics, and disease. As students explore these biomolecules, they unlock a deeper understanding of the complexity and beauty of living systems.

FAQ

Phospholipids are fundamental components of cell membranes, playing a crucial role in determining their structure and function. A phospholipid molecule consists of a glycerol backbone, two fatty acid tails (hydrophobic), and a phosphate group attached to a head (hydrophilic). This amphipathic nature (having both hydrophobic and hydrophilic parts) is crucial for forming the lipid bilayer of cell membranes. In water, phospholipids spontaneously arrange themselves into a bilayer, with the hydrophobic tails pointing inwards, away from the water, and the hydrophilic heads facing outwards, interacting with the aqueous environment. This arrangement creates a stable barrier that separates the interior of the cell from its external environment. The fluid mosaic model of the cell membrane describes how these phospholipids, along with proteins and cholesterol, move laterally within the layer, contributing to membrane fluidity and flexibility. This fluid nature allows for the controlled entry and exit of substances, signalling, and cell recognition, making phospholipids indispensable in cell membrane function.

Saturated and unsaturated fats differ in the structure of their fatty acid chains. Saturated fats have no double bonds between carbon atoms, resulting in straight chains that pack tightly together, typically making them solid at room temperature. Common sources include butter and red meat. In contrast, unsaturated fats contain one or more double bonds, causing kinks in the chain that prevent tight packing, often making them liquid at room temperature, like olive oil. Regarding health, saturated fats are associated with increased levels of LDL cholesterol (low-density lipoprotein), which can contribute to cardiovascular diseases. Unsaturated fats, particularly monounsaturated and polyunsaturated fats, are considered healthier as they can lower LDL cholesterol levels and provide essential fatty acids like omega-3 and omega-6, which are crucial for brain function and cell growth. It is important to balance the intake of different types of fats for optimal health.

Monosaccharides are the simplest form of carbohydrates, consisting of single sugar molecules like glucose, fructose, and galactose. They typically have a basic formula of (CH2O)n and are the building blocks for more complex carbohydrates. Monosaccharides are readily absorbed and used for immediate energy. Polysaccharides, on the other hand, are long chains of monosaccharide units linked together. They include starch, glycogen, and cellulose. Starch, found in plants, and glycogen, found in animals, serve as energy storage forms. Cellulose, a major component of plant cell walls, provides structural support. The key difference lies in their structure: monosaccharides are single units, quick to digest and provide fast energy, whereas polysaccharides are complex, providing sustained energy release and structural functions.

The R-group, or side chain, in amino acids is critical in determining the properties and function of proteins. Each of the 20 amino acids has a unique R-group, which can range from a simple hydrogen atom to more complex structures with rings or charged groups. These side chains influence the amino acid's behaviour and interactions. For example, amino acids with hydrophobic (water-repelling) side chains tend to be found in the interior of proteins, stabilising the structure, while hydrophilic (water-attracting) side chains are often on the surface, interacting with the aqueous environment. The R-groups also facilitate specific interactions between amino acids, like hydrogen bonding, ionic interactions, and disulphide bridges, which are crucial in forming and stabilising the protein's tertiary and quaternary structures. The diversity of R-groups contributes to the immense variety of protein structures and functions, from enzymes and antibodies to transport proteins and hormones.

Enzymes are made of proteins primarily because of the versatile and complex nature of proteins, which allows them to form highly specific and intricate structures necessary for enzyme function. The sequence of amino acids in a protein determines its three-dimensional shape, which is essential for enzyme activity. Enzymes have active sites, specific regions where substrate molecules bind and undergo chemical reactions. The specificity of these active sites arises from the unique arrangement of amino acids, forming a shape that perfectly complements the substrate. Additionally, the flexibility of proteins allows enzymes to undergo slight conformational changes to facilitate binding and catalysis (induced fit model). This specificity and ability to change shape are not as readily achievable with other biomolecules like lipids or carbohydrates, making proteins the ideal candidates for enzymatic roles.

Practice Questions

Describe the structure and function of proteins in living organisms. Explain how the structure of proteins relates to their function.

Proteins are complex molecules composed of amino acids linked by peptide bonds. Their structure is organised into four levels: primary (sequence of amino acids), secondary (folding into α-helices and β-pleated sheets), tertiary (3D shape), and quaternary (assembly of multiple polypeptide chains). This intricate structure allows proteins to perform a variety of functions. Enzymes, a type of protein, catalyse biochemical reactions, increasing their rate. Structural proteins like collagen provide support and strength to tissues. Transport proteins, such as hemoglobin, carry substances like oxygen in the blood. The specific shape of proteins, determined by their amino acid sequence, is crucial for their function. For instance, the unique shape of an enzyme's active site allows it to bind specifically to its substrate, demonstrating the relationship between structure and function in proteins.

Explain how carbohydrates are used in living organisms and discuss the importance of their chemical structure in fulfilling these roles.

Carbohydrates, primarily composed of carbon, hydrogen, and oxygen, are crucial energy sources for living organisms. Their simple structure, often in a 1:2:1 ratio (C:H:O), allows for quick and efficient energy release, essential for metabolic processes like cellular respiration. For example, glucose, a monosaccharide, is a key energy source that is readily utilised in cells to produce ATP. Additionally, carbohydrates have structural roles. Cellulose, a polysaccharide, forms the rigid cell wall in plants, providing structural support and protection. The structure of carbohydrates, whether as simple sugars or complex polysaccharides, directly influences their role in organisms. Simple sugars provide immediate energy, while complex carbohydrates like starch and glycogen serve as energy storage, and cellulose provides structural support.

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