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CIE A-Level Biology Study Notes

12.2.2 Glycolysis Details

Glycolysis, a central metabolic pathway, plays a pivotal role in the breakdown of glucose to pyruvate, producing energy in the form of ATP and NADH. This pathway is the initial step in both aerobic and anaerobic respiration, fundamental to cellular energy production. The following detailed notes explore each stage of glycolysis, highlighting the critical biochemical steps and their significance.

Introduction to Glycolysis

Glycolysis, occurring in the cell's cytoplasm, is an anaerobic process, meaning it does not require oxygen. It consists of ten enzymatic steps, divided into two phases: the energy investment phase and the energy payoff phase. This pathway is universal across different life forms, underlining its essential role in cellular metabolism.

Energy Investment Phase

The energy investment phase involves the consumption of ATP to prepare the glucose molecule for subsequent energy extraction.

  • Step 1: Glucose Activation: The pathway begins with the phosphorylation of glucose to form glucose-6-phosphate. This reaction is catalysed by the enzyme hexokinase and consumes one molecule of ATP. The phosphorylation traps glucose within the cell due to the negative charge of the phosphate group.
  • Step 2: Isomerisation: The glucose-6-phosphate is then rearranged into its isomer, fructose-6-phosphate, by the enzyme phosphoglucose isomerase. This structural change is crucial for the next phosphorylation step.
  • Step 3: Second Phosphorylation: The enzyme phosphofructokinase, a key regulator of glycolysis, catalyses the conversion of fructose-6-phosphate into fructose-1,6-bisphosphate, using another ATP molecule. This step is irreversible under physiological conditions and is a major control point in glycolysis.
  • Step 4: Cleavage of Sugar Molecule: The six-carbon sugar molecule, fructose-1,6-bisphosphate, is split into two three-carbon molecules: glyceraldehyde-3-phosphate (G3P) and dihydroxyacetone phosphate (DHAP) by the enzyme aldolase. Although both molecules can continue through glycolysis, only G3P proceeds directly.

Energy Payoff Phase

The energy payoff phase is where the invested ATP is recovered, and additional ATP and NADH are produced.

  • Step 5: Conversion to G3P: The enzyme triose phosphate isomerase rapidly converts DHAP into G3P. As a result, each glucose molecule eventually results in two G3P molecules entering the subsequent steps of glycolysis.
  • Step 6: Oxidation and Phosphate Transfer: Each G3P molecule undergoes oxidation, catalysed by the enzyme glyceraldehyde-3-phosphate dehydrogenase. In this step, NAD+ is reduced to NADH as it accepts electrons, and a phosphate group is added to form 1,3-bisphosphoglycerate.
  • Step 7: First ATP Generation: The enzyme phosphoglycerate kinase catalyses the transfer of a high-energy phosphate group from 1,3-bisphosphoglycerate to ADP, forming one molecule of ATP and 3-phosphoglycerate. This step occurs for each of the two 3-phosphoglycerate molecules.
  • Step 8: Rearrangement: Phosphoglycerate mutase rearranges 3-phosphoglycerate into 2-phosphoglycerate. This rearrangement facilitates the subsequent extraction of more energy.
  • Step 9: Dehydration: The enzyme enolase removes a water molecule from 2-phosphoglycerate, resulting in the formation of phosphoenolpyruvate (PEP), a high-energy compound.
  • Step 10: Second ATP Generation: Finally, PEP donates its high-energy phosphate group to ADP, forming another ATP molecule. This reaction, catalysed by the enzyme pyruvate kinase, results in the production of pyruvate.
A diagram showing the steps involved in glycolysis.

Image courtesy of trinset

Role of NAD in Glycolysis

NAD (Nicotinamide adenine dinucleotide) is a critical coenzyme in glycolysis, acting as an electron carrier.

  • Electron Acceptance and Transfer: In the sixth step of glycolysis, NAD+ accepts electrons during the oxidation of G3P, forming NADH. This reduction of NAD+ to NADH is vital for maintaining the redox balance in the cell and for transferring energy to other parts of cellular respiration.
  • NADH in Cellular Respiration: The NADH produced in glycolysis is later used in the electron transport chain, particularly in aerobic conditions, contributing to the generation of a significant amount of ATP.

Net Gain of ATP and NADH

The entire glycolysis process yields a net gain of energy carriers per glucose molecule.

  • ATP: While a total of four ATP molecules are generated in the payoff phase, two ATPs are consumed in the investment phase. Therefore, the net gain is two ATP molecules per glucose molecule.
  • NADH: Two molecules of NADH are generated, which can be further utilised in the electron transport chain in aerobic respiration or in fermentation processes under anaerobic conditions.
Image courtesy of EMBIBE

Image courtesy of EMBIBE

Summary of Glycolysis Steps

Here's a summarised sequence of the glycolysis pathway:

  • 1. Glucose Activation: Glucose → Glucose-6-Phosphate (Hexokinase).
  • 2. Isomerisation: Glucose-6-Phosphate → Fructose-6-Phosphate (Phosphoglucose Isomerase).
  • 3. Second Phosphorylation: Fructose-6-Phosphate → Fructose-1,6-Bisphosphate (Phosphofructokinase).
  • 4. Cleavage: Fructose-1,6-Bisphosphate → G3P + DHAP (Aldolase).
  • 5. Conversion to G3P: DHAP → G3P (Triose Phosphate Isomerase).
  • 6. Oxidation and Phosphate Transfer: G3P → 1,3-Bisphosphoglycerate (Glyceraldehyde-3-Phosphate Dehydrogenase).
  • 7. First ATP Generation: 1,3-Bisphosphoglycerate → 3-Phosphoglycerate (Phosphoglycerate Kinase).
  • 8. Rearrangement: 3-Phosphoglycerate → 2-Phosphoglycerate (Phosphoglycerate Mutase).
  • 9. Dehydration: 2-Phosphoglycerate → PEP (Enolase).
  • 10. Second ATP Generation: PEP → Pyruvate (Pyruvate Kinase).

Understanding glycolysis provides a foundation for comprehending more complex biochemical processes in cells. This pathway not only supplies energy but also intermediates for other metabolic pathways, highlighting its central role in cellular metabolism.

FAQ

The reduction of NAD+ to NADH in glycolysis plays a significant role in the cell's overall energy production, especially under aerobic conditions. NADH, carrying high-energy electrons, is a crucial molecule in the electron transport chain (ETC), located in the inner mitochondrial membrane. In the ETC, these electrons are transferred through a series of protein complexes, driving the production of a large amount of ATP through oxidative phosphorylation. The regeneration of NAD+ from NADH is essential for the continuity of glycolysis, as a constant supply of NAD+ is required for the oxidation step in glycolysis to proceed.

The initial investment of ATP in glycolysis serves two main purposes. First, it helps in trapping glucose within the cell. The phosphorylation of glucose to glucose-6-phosphate adds a negatively charged phosphate group, making it more difficult for the molecule to pass through the cell membrane. Secondly, these phosphorylation reactions prime the glucose molecule for subsequent cleavage and energy extraction. By adding high-energy phosphate groups, the molecule is destabilised, facilitating its eventual split into two three-carbon molecules. This investment is crucial as it kickstarts the process of energy extraction from glucose, which is later recouped with a net gain of ATP.

Yes, glycolysis can occur in the absence of oxygen, a condition known as anaerobic glycolysis. In the absence of oxygen, the cell cannot fully oxidise the products of glycolysis via the Krebs cycle and the electron transport chain. To maintain glycolysis under these conditions, cells regenerate NAD+ by reducing pyruvate into lactate in animal cells or into ethanol and carbon dioxide in yeast cells. This process, known as fermentation, allows for the continuation of ATP production via glycolysis even when oxygen is scarce. However, the ATP yield from anaerobic glycolysis is much lower than that of aerobic respiration.

Pyruvate, the end product of glycolysis, can undergo several different pathways depending on the oxygen availability and the cell type. In aerobic conditions, pyruvate is transported into mitochondria, where it's converted into acetyl-CoA by the enzyme pyruvate dehydrogenase. Acetyl-CoA then enters the Krebs cycle for further energy production. In anaerobic conditions, such as in muscle cells during intense exercise, pyruvate is reduced to lactate by lactate dehydrogenase, regenerating NAD+ for glycolysis to continue. In yeast and some bacteria, pyruvate undergoes alcoholic fermentation, converting into ethanol and carbon dioxide, again regenerating NAD+.

Glycolysis is tightly regulated at various steps, primarily by allosteric enzymes that respond to the cellular energy status. The most crucial regulatory point is at the enzyme phosphofructokinase (PFK), which catalyses the conversion of fructose-6-phosphate to fructose-1,6-bisphosphate. PFK is inhibited by ATP (a sign of high energy) and stimulated by AMP (a sign of low energy). This regulation ensures that glycolysis proceeds rapidly when energy is needed and slows down when the cell has ample ATP. Additionally, citrate, a Krebs cycle intermediate, inhibits PFK, linking glycolysis to the cell’s overall metabolic state. Hexokinase, the first enzyme in glycolysis, is also regulated. It's inhibited by its product, glucose-6-phosphate, preventing unnecessary glucose phosphorylation when glucose-6-phosphate is abundant.

Practice Questions

Describe the changes in energy carriers (ATP and NADH) during the glycolysis pathway.

An excellent answer would involve a detailed explanation of the changes in ATP and NADH during glycolysis. Initially, two ATP molecules are consumed in the energy investment phase. The first ATP is used to convert glucose into glucose-6-phosphate, and the second ATP is used to convert fructose-6-phosphate into fructose-1,6-bisphosphate. Subsequently, in the energy payoff phase, a total of four ATPs are produced (two from each 1,3-bisphosphoglycerate molecule converting to 3-phosphoglycerate, and two more when phosphoenolpyruvate converts to pyruvate). This results in a net gain of two ATP molecules. Additionally, two molecules of NADH are produced when each glyceraldehyde-3-phosphate is oxidised to 1,3-bisphosphoglycerate, carrying high-energy electrons to the electron transport chain in aerobic conditions or used in fermentation processes under anaerobic conditions.

Explain why the phosphorylation of glucose is an essential step in glycolysis.

The phosphorylation of glucose to form glucose-6-phosphate, catalysed by the enzyme hexokinase, is crucial for several reasons. Firstly, it helps to trap glucose within the cell, as the added phosphate group adds a negative charge, making the glucose-6-phosphate unable to easily cross the cell membrane. Secondly, it acts as a commitment step; once phosphorylated, glucose is committed to being metabolised by the cell. Finally, the phosphorylation of glucose to glucose-6-phosphate is the first step in destabilising the glucose molecule, making it more reactive and primed for subsequent enzymatic reactions that lead to energy extraction in the form of ATP and NADH.

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